After installing v3.2 (including the optional games) I logged in using my pre-existing user /home directory. Problems were immediately evident. First, a number of application shortcuts on my desktop no longer worked, including the sauerbraten shortcut. Apps I KNOW were installed. Many in the applications menu were broken, and many installed games were absent.
Then, after a reboot and login I saw two compiz icons in the system tray. Then, when trying to launch azureus I found it not working.
So, after a bit of work I renamed the user directory, deleted the user, created it again, and had kuser create a new user directory. No matter what I did, the best I could get WITH the proper application menu entries was a default kde user directory (standard single panel kde desktop layout). I manually recreated the Sabayon layout and am currently migrating my old info a bit at a time.
Even so, a problem still exists. Azureus still doesn't work. I re-emerged it, and it still doesn't work.
I have to wonder if critical java components are missing.

